EnhancerDB
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  3. rs114580388[chr16:27338630]
Enhancers that have rs114580388[chr16:27338630]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27322265 27344955 enh16614
Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs114580388[chr16:27338630]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27338051 27338721 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108190519
chr16 27338110 27338790 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700769
chr16 27338110 27338790 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108190520
chr16 27338211 27338811 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108190530
chr16 27338247 27338651 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700780
chr16 27338247 27338651 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108190536
chr16 27338266 27338636 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700781
chr16 27338266 27338636 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108190537
chr16 27338273 27338789 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700783
chr16 27338273 27338789 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108190541
chr16 27338300 27338640 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21700787
chr16 27338300 27338640 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108190545
chr16 27338319 27338715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21700788
chr16 27338319 27338715 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108190546
chr16 27338324 27338648 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108190547
chr16 27338334 27338644 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108190549
chr16 27338363 27338687 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108190551
chr16 27338471 27338695 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21700791
chr16 27338471 27338695 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108190554
chr16 27338502 27338732 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21700792
chr16 27338502 27338732 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108190555
chr16 27338621 27338642 ZNF263 JASPAR yes 10187175
chr16 27338624 27338645 ZNF263 JASPAR yes 10187176
chr16 27338626 27338636 SP1 JASPAR yes 10187177
chr16 27338628 27338633 SP1 TRANSFAC yes 10187178
chr16 27338628 27338634 SP1 TRANSFAC yes 10187179
chr16 27338628 27338635 SP1 TRANSFAC yes 10187180
chr16 27338629 27338641 INSM1 JASPAR yes 10187181
chr16 27338629 27338644 NR2C2 JASPAR yes 10187182
chr16 27338630 27338644 PLAG1 JASPAR yes 10187183
chr16 27338630 27338651 ZNF263 JASPAR yes 10187184
Genes associated with rs114580388[chr16:27338630], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More