EnhancerDB
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  3. rs11459501[chr12:54052594]
Enhancers that have rs11459501[chr12:54052594]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54048865 54056820 enh14743
Prostate (PC-3) Liver (HepG2) Large Intestine Lung (PC-9) Astrocyte Stomach Placenta Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs11459501[chr12:54052594]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54049783 54055288 ZNF274 GTRD no Blood (GM12878) 108036404
chr12 54051971 54055194 ZNF274 GTRD no Blood (GM12878) 108036405
chr12 54052311 54054538 ZNF274 GTRD no Blood (GM12878) 108036406
chr12 54052324 54054404 ZNF274 GTRD no Blood (GM12878) 108036407
chr12 54052384 54053750 TCF7L2 GTRD no Colon (HCT116) 108036408
chr12 54052462 54053909 ZNF274 GTRD no Blood (GM12878) 108036409
chr12 54052496 54054902 ZNF274 GTRD no Blood (GM12878) 108036410
chr12 54052506 54054261 ZNF274 GTRD no Blood (GM12878) 108036411
chr12 54052515 54054674 ZNF274 GTRD no Blood (GM12878) 108036412
chr12 54052539 54055233 ZBTB33 GTRD no Lung (A549) 108036413
chr12 54052567 54054038 ZNF274 GTRD no Blood (GM12878) 108036414
chr12 54052574 54054869 ZNF274 GTRD no Blood (GM12878) 108036415
chr12 54052579 54054254 ZNF274 GTRD no Blood (GM12878) 108036416
chr12 54052587 54054446 STAT3 GTRD no Blood (OCI-LY7) 108036417
chr12 54052588 54052609 IRF1 JASPAR yes 121000496
chr12 54052590 54052605 STAT2 JASPAR yes 121000497
chr12 54052593 54052608 FOXP1 JASPAR yes 121000498
chr12 54052594 54052609 FOXP1 JASPAR yes 121000499
chr12 54052594 54054322 ZBTB33 GTRD no Lung (A549) 108036418
Genes associated with rs11459501[chr12:54052594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More