EnhancerDB
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  3. rs114805589[chr1:212655576]
Enhancers that have rs114805589[chr1:212655576]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs114805589[chr1:212655576]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 21378808
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 107868375
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 107868376
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 21378809
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 107868377
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 107868378
chr1 212655428 212655958 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378810
chr1 212655428 212655958 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107868379
chr1 212655462 212655789 ZNF143 GTRD no Epithelial (MCF-7) 21378811
chr1 212655462 212655789 ZNF143 GTRD no Epithelial (MCF-7) 107868380
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 21378812
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 107868381
chr1 212655540 212656056 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378813
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 21378814
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 107868382
chr1 212655563 212655577 RXRG JASPAR yes 35128354
chr1 212655563 212655579 NFYA JASPAR yes 35128355
chr1 212655566 212655581 NFYB JASPAR yes 35128357
chr1 212655572 212655576 ESR1 TRANSFAC yes 35128358
Genes associated with rs114805589[chr1:212655576], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More