EnhancerDB
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  3. rs115018909[chr16:28104444]
Enhancers that have rs115018909[chr16:28104444]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28098765 28106942 enh16617
Skin (Keratinocyte) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Thyroid Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs115018909[chr16:28104444]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28104387 28105022 ZNF143 GTRD no Epithelial (MCF-7) 21701341
chr16 28104430 28104445 TFAP2A JASPAR yes 10217305
chr16 28104430 28104445 TFAP2C JASPAR yes 10217306
chr16 28104438 28104448 GBX2 JASPAR yes 10217308
chr16 28104438 28104448 MNX1 JASPAR yes 10217309
chr16 28104438 28104448 RAX JASPAR yes 10217310
chr16 28104438 28104453 HNF1A JASPAR yes 10217311
chr16 28104439 28104447 BARX1 JASPAR yes 10217312
chr16 28104439 28104447 BSX JASPAR yes 10217313
chr16 28104439 28104447 ISL2 JASPAR yes 10217314
chr16 28104439 28104447 LMX1B JASPAR yes 10217315
chr16 28104439 28104447 MSX1 JASPAR yes 10217316
chr16 28104439 28104447 MSX2 JASPAR yes 10217317
chr16 28104439 28104452 HNF1B JASPAR yes 10217318
chr16 28104440 28104450 PAX3 JASPAR yes 10217319
chr16 28104440 28104450 PAX7 JASPAR yes 10217320
chr16 28104442 28104452 EMX1 JASPAR yes 10217321
chr16 28104442 28104452 EMX2 JASPAR yes 10217322
chr16 28104442 28104452 ESX1 JASPAR yes 10217323
chr16 28104442 28104452 GSX1 JASPAR yes 10217324
chr16 28104442 28104452 GSX2 JASPAR yes 10217325
chr16 28104442 28104452 HESX1 JASPAR yes 10217326
chr16 28104442 28104452 HOXB2 JASPAR yes 10217327
chr16 28104442 28104452 HOXB3 JASPAR yes 10217328
chr16 28104442 28104452 LBX2 JASPAR yes 10217329
chr16 28104442 28104452 LHX2 JASPAR yes 10217330
chr16 28104442 28104452 LHX6 JASPAR yes 10217331
chr16 28104442 28104452 MIXL1 JASPAR yes 10217332
chr16 28104442 28104452 MNX1 JASPAR yes 10217333
chr16 28104442 28104452 NOTO JASPAR yes 10217334
chr16 28104442 28104452 POU6F1 JASPAR yes 10217335
chr16 28104442 28104452 RAX JASPAR yes 10217336
chr16 28104443 28104451 ISX JASPAR yes 10217337
chr16 28104443 28104451 LMX1A JASPAR yes 10217338
chr16 28104443 28104451 LMX1B JASPAR yes 10217339
chr16 28104443 28104451 NKX6-1 JASPAR yes 10217340
chr16 28104443 28104451 NKX6-2 JASPAR yes 10217341
chr16 28104443 28104451 PRRX1 JASPAR yes 10217342
chr16 28104443 28104451 RAX2 JASPAR yes 10217343
chr16 28104443 28104451 SHOX JASPAR yes 10217344
chr16 28104443 28104451 UNCX JASPAR yes 10217345
chr16 28104443 28104451 VAX1 JASPAR yes 10217346
Genes associated with rs115018909[chr16:28104444], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More