EnhancerDB
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  3. rs115060617[chr19:13166964]
Enhancers that have rs115060617[chr19:13166964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
chr19 13163511 13167355 vista791
VISTA
chr19 13166882 13167358 vista28685
VISTA
Transcript factors that have rs115060617[chr19:13166964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13166102 13167012 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107690440
chr19 13166102 13167012 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108388442
chr19 13166402 13168435 ZNF274 GTRD no Cervix (HeLa-S3) 107690441
chr19 13166402 13168435 ZNF274 GTRD no Cervix (HeLa-S3) 108388443
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 21850576
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 107690442
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 108388444
chr19 13166474 13168499 ZBTB33 GTRD no Lung (A549) 107690443
chr19 13166474 13168499 ZBTB33 GTRD no Lung (A549) 108388445
chr19 13166647 13168377 ZNF274 GTRD no Cervix (HeLa-S3) 107690444
chr19 13166647 13168377 ZNF274 GTRD no Cervix (HeLa-S3) 108388446
chr19 13166655 13167158 ZNF274 GTRD no Bone Marrow (K562) 107690445
chr19 13166655 13167158 ZNF274 GTRD no Bone Marrow (K562) 108388447
chr19 13166674 13168554 ZNF274 GTRD no Blood (GM12878) 107690446
chr19 13166674 13168554 ZNF274 GTRD no Blood (GM12878) 108388448
chr19 13166687 13168399 ZNF274 GTRD no Blood (GM12878) 107690447
chr19 13166687 13168399 ZNF274 GTRD no Blood (GM12878) 108388449
chr19 13166719 13167054 ZNF274 GTRD no Bone Marrow (K562) 107690448
chr19 13166719 13167054 ZNF274 GTRD no Bone Marrow (K562) 108388450
chr19 13166731 13167195 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21850577
chr19 13166731 13167195 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107690449
chr19 13166731 13167195 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108388451
chr19 13166741 13169326 ZNF274 GTRD no Blood (GM12878) 107690450
chr19 13166741 13169326 ZNF274 GTRD no Blood (GM12878) 108388452
chr19 13166773 13167083 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21850578
chr19 13166773 13167083 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107690451
chr19 13166773 13167083 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108388453
chr19 13166782 13168447 ZBTB33 GTRD no Lung (A549) 107690452
chr19 13166782 13168447 ZBTB33 GTRD no Lung (A549) 108388454
chr19 13166787 13167048 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21850579
chr19 13166787 13167048 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107690453
chr19 13166787 13167048 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108388455
chr19 13166792 13167168 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107690454
chr19 13166792 13167168 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108388456
chr19 13166801 13168276 ZBTB33 GTRD no Lung (A549) 107690455
chr19 13166801 13168276 ZBTB33 GTRD no Lung (A549) 108388457
chr19 13166803 13167399 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21850580
chr19 13166803 13167399 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107690456
chr19 13166803 13167399 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108388458
chr19 13166811 13167107 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 107690457
chr19 13166811 13167107 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108388459
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 21850581
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 107690458
chr19 13166817 13168668 TCF7L2 GTRD no Colon (HCT116) 108388460
chr19 13166827 13168368 ZNF274 GTRD no Liver (HepG2) 21850582
chr19 13166827 13168368 ZNF274 GTRD no Liver (HepG2) 107690459
chr19 13166827 13168368 ZNF274 GTRD no Liver (HepG2) 108388461
chr19 13166854 13168594 ZBTB33 GTRD no Lung (A549) 107690460
chr19 13166854 13168594 ZBTB33 GTRD no Lung (A549) 108388462
chr19 13166855 13168162 ZBTB33 GTRD no Brain (SK-N-SH) 21850583
chr19 13166855 13168162 ZBTB33 GTRD no Brain (SK-N-SH) 107690461
chr19 13166855 13168162 ZBTB33 GTRD no Brain (SK-N-SH) 108388463
chr19 13166873 13167771 ZNF274 GTRD no Bone Marrow (K562) 107690462
chr19 13166873 13167771 ZNF274 GTRD no Bone Marrow (K562) 108388464
chr19 13166877 13168254 ZNF274 GTRD no Liver (HepG2) 21850584
chr19 13166877 13168254 ZNF274 GTRD no Liver (HepG2) 107690463
chr19 13166877 13168254 ZNF274 GTRD no Liver (HepG2) 108388465
chr19 13166886 13168324 ZBTB33 GTRD no Lung (A549) 107690464
chr19 13166886 13168324 ZBTB33 GTRD no Lung (A549) 108388466
chr19 13166891 13168407 ZBTB33 GTRD no Lung (A549) 107690465
chr19 13166891 13168407 ZBTB33 GTRD no Lung (A549) 108388467
chr19 13166925 13167165 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107690466
chr19 13166925 13167165 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108388468
chr19 13166937 13168541 ZNF274 GTRD no Cervix (HeLa-S3) 107690467
chr19 13166937 13168541 ZNF274 GTRD no Cervix (HeLa-S3) 108388469
Genes associated with rs115060617[chr19:13166964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More