EnhancerDB
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  3. rs115078842[chr17:46580118]
Enhancers that have rs115078842[chr17:46580118]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs115078842[chr17:46580118]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46579758 46580170 TCF7L2 GTRD no Colon (HCT116) 21767805
chr17 46579831 46580366 ZNF274 GTRD no Bone Marrow (K562) 21767808
chr17 46579834 46580197 ZNF274 GTRD no Bone Marrow (K562) 21767809
chr17 46579880 46580155 ZBTB33 GTRD no Lung (A549) 21767810
chr17 46579893 46580140 ZBTB33 GTRD no Lung (A549) 21767811
chr17 46579896 46580129 ZNF274 GTRD no Blood (GM12878) 21767812
chr17 46579910 46580125 ZNF274 GTRD no Blood (GM12878) 21767813
chr17 46579912 46580123 ZNF274 GTRD no Bone Marrow (K562) 21767814
chr17 46580113 46580133 TP63 JASPAR yes 54590986
chr17 46580114 46580132 TP53 JASPAR yes 54590987
chr17 46580114 46580132 TP73 JASPAR yes 54590988
Genes associated with rs115078842[chr17:46580118], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More