EnhancerDB
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  3. rs115111341[chr17:53514160]
Enhancers that have rs115111341[chr17:53514160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs115111341[chr17:53514160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53514149 53514162 ZBTB18 JASPAR yes 54850399
chr17 53514151 53514160 SNAI2 JASPAR yes 54850400
chr17 53514151 53514161 FIGLA JASPAR yes 54850401
chr17 53514151 53514161 ID4 JASPAR yes 54850402
chr17 53514151 53514161 MSC JASPAR yes 54850403
chr17 53514151 53514161 TCF3 JASPAR yes 54850404
chr17 53514151 53514161 TCF4 JASPAR yes 54850405
chr17 53514157 53514165 FOXO3 JASPAR yes 54850406
chr17 53514157 53514168 FOXA1 JASPAR yes 54850407
chr17 53514157 53514174 BCL6B JASPAR yes 54850408
chr17 53514158 53514173 STAT1 JASPAR yes 54850409
chr17 53514160 53514171 STAT1 JASPAR yes 54850410
chr17 53514160 53514171 STAT3 JASPAR yes 54850411
Genes associated with rs115111341[chr17:53514160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More