EnhancerDB
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  3. rs115148234[chr17:55682208]
Enhancers that have rs115148234[chr17:55682208]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115148234[chr17:55682208]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55682194 55682212 ESR1 JASPAR yes 54974309
chr17 55682202 55682214 PKNOX2 JASPAR yes 54974310
chr17 55682205 55682210 USF2 TRANSFAC yes 54974311
chr17 55682208 55682222 TLX1 JASPAR yes 54974312
Genes associated with rs115148234[chr17:55682208], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More