EnhancerDB
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  3. rs115177194[chr16:28210475]
Enhancers that have rs115177194[chr16:28210475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs115177194[chr16:28210475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28210458 28210479 IRF1 JASPAR yes 10222337
chr16 28210461 28210475 IRF7 JASPAR yes 10222338
chr16 28210462 28210476 STAT1 JASPAR yes 10222339
chr16 28210462 28210477 PRDM1 JASPAR yes 10222340
chr16 28210462 28210477 STAT2 JASPAR yes 10222341
chr16 28210465 28210476 PHOX2A JASPAR yes 10222342
chr16 28210465 28210476 PROP1 JASPAR yes 10222343
chr16 28210470 28210481 DUX4 JASPAR yes 10222344
chr16 28210470 28210481 PHOX2A JASPAR yes 10222345
chr16 28210470 28210481 PROP1 JASPAR yes 10222346
chr16 28210475 28210486 PHOX2A JASPAR yes 10222347
chr16 28210475 28210486 PROP1 JASPAR yes 10222348
Genes associated with rs115177194[chr16:28210475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More