EnhancerDB
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  3. rs115193652[chr1:54144454]
Enhancers that have rs115193652[chr1:54144454]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54142285 54153175 enh26712
Brain (SK-N-SH) Large Intestine Astrocyte Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs115193652[chr1:54144454]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54143916 54144986 ZNF143 GTRD no Epithelial (MCF-7) 107804213
chr1 54144238 54144787 TCF7L2 GTRD no Colon (HCT116) 107804214
chr1 54144449 54144454 TFAP2A TRANSFAC yes 28945897
chr1 54144449 54144455 MZF1 JASPAR yes 28945898
chr1 54144450 54144460 SP1 JASPAR yes 28945899
chr1 54144451 54144456 ETS2 TRANSFAC yes 28945900
chr1 54144451 54144463 INSM1 JASPAR yes 28945901
chr1 54144453 54144463 MZF1 JASPAR yes 28945902
chr1 54144454 54144469 HNF4G JASPAR yes 28945903
chr1 54144454 54144469 NR2C2 JASPAR yes 28945904
chr1 54144454 54144472 RARA JASPAR yes 28945905
Genes associated with rs115193652[chr1:54144454], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More