EnhancerDB
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  3. rs115298008[chr18:56514616]
Enhancers that have rs115298008[chr18:56514616]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56508646 56521424 enh17749
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Muscle (A673) Placenta Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs115298008[chr18:56514616]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56514528 56514804 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824386
chr18 56514528 56514804 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338657
chr18 56514529 56515019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824387
chr18 56514529 56515019 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338658
chr18 56514541 56514801 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824388
chr18 56514541 56514801 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338659
chr18 56514558 56514934 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824389
chr18 56514558 56514934 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338660
chr18 56514564 56514888 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824390
chr18 56514564 56514888 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338661
chr18 56514569 56514979 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21824391
chr18 56514569 56514979 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108338662
chr18 56514607 56514616 RUNX2 JASPAR yes 110983108
Genes associated with rs115298008[chr18:56514616], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More