EnhancerDB
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  3. rs115420459[chr17:39697456]
Enhancers that have rs115420459[chr17:39697456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39688905 39708275 enh17150
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs115420459[chr17:39697456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39697093 39697469 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21757661
chr17 39697099 39697499 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21757662
chr17 39697119 39697475 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21757663
chr17 39697399 39697643 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21757664
chr17 39697448 39697460 NHLH1 JASPAR yes 54262927
chr17 39697454 39697465 FOXA1 JASPAR yes 54262928
chr17 39697455 39697461 ESR1 TRANSFAC yes 54262929
Genes associated with rs115420459[chr17:39697456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More