EnhancerDB
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  3. rs115427709[chr12:93501561]
Enhancers that have rs115427709[chr12:93501561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 93499545 93526304 enh14896
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115427709[chr12:93501561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 93501293 93501855 ZNF274 GTRD no Bone Marrow (K562) 21563895
chr12 93501494 93501784 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21563896
chr12 93501545 93501566 IRF1 JASPAR yes 122819744
chr12 93501550 93501565 FOXP1 JASPAR yes 122819745
chr12 93501550 93501571 IRF1 JASPAR yes 122819746
chr12 93501551 93501572 IRF1 JASPAR yes 122819747
chr12 93501555 93501569 IRF7 JASPAR yes 122819748
chr12 93501557 93501563 TCF4 TRANSFAC yes 122819749
chr12 93501557 93501572 FOXP1 JASPAR yes 122819750
chr12 93501558 93501567 SRY JASPAR yes 122819751
chr12 93501558 93501569 FOXP2 JASPAR yes 122819752
chr12 93501558 93501570 FOXC2 JASPAR yes 122819753
chr12 93501559 93501570 FOXC1 JASPAR yes 122819754
chr12 93501560 93501571 FOXA1 JASPAR yes 122819755
chr12 93501561 93501575 IRF7 JASPAR yes 122819756
Genes associated with rs115427709[chr12:93501561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More