EnhancerDB
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  3. rs115443652[chr1:23912297]
Enhancers that have rs115443652[chr1:23912297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 23912037 23912393 vista750
VISTA
Transcript factors that have rs115443652[chr1:23912297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23907496 23914124 ZNF274 GTRD no Blood (GM12878) 21325282
chr1 23907496 23914124 ZNF274 GTRD no Blood (GM12878) 107802428
chr1 23912293 23912300 JUN TRANSFAC yes 27443730
chr1 23912293 23912300 JUN TRANSFAC yes 118249815
chr1 23912293 23912301 CREB1 JASPAR yes 27443731
chr1 23912293 23912301 GMEB2 JASPAR yes 27443732
chr1 23912293 23912301 CREB1 JASPAR yes 118249816
chr1 23912293 23912301 GMEB2 JASPAR yes 118249817
chr1 23912295 23912300 ATF1 TRANSFAC yes 27443733
chr1 23912295 23912300 ATF1 TRANSFAC yes 118249818
Genes associated with rs115443652[chr1:23912297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More