EnhancerDB
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  3. rs115452670[chr1:118197609]
Enhancers that have rs115452670[chr1:118197609]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118194385 118210705 enh589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs115452670[chr1:118197609]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118197058 118197742 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334563
chr1 118197058 118197742 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825301
chr1 118197070 118197730 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334564
chr1 118197070 118197730 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825302
chr1 118197184 118197700 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334567
chr1 118197184 118197700 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825307
chr1 118197210 118197730 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334568
chr1 118197210 118197730 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107825308
chr1 118197585 118198161 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107825327
chr1 118197604 118197612 BSX JASPAR yes 31889723
chr1 118197604 118197612 DLX6 JASPAR yes 31889724
chr1 118197604 118197612 MSX1 JASPAR yes 31889725
chr1 118197604 118197612 MSX2 JASPAR yes 31889726
chr1 118197608 118197614 NFIC JASPAR yes 31889727
Genes associated with rs115452670[chr1:118197609], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More