EnhancerDB
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  3. rs115476235[chr15:41208624]
Enhancers that have rs115476235[chr15:41208624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41192765 41214015 enh3543
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs115476235[chr15:41208624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41208411 41208808 TCF7L2 GTRD no Colon (HCT116) 21651040
chr15 41208614 41208624 HOXD13 JASPAR yes 22963167
chr15 41208614 41208625 HOXA10 JASPAR yes 22963168
chr15 41208615 41208625 ALX3 JASPAR yes 22963169
chr15 41208615 41208625 GSX1 JASPAR yes 22963170
chr15 41208615 41208625 GSX2 JASPAR yes 22963171
chr15 41208615 41208625 HOXB2 JASPAR yes 22963172
chr15 41208615 41208625 HOXB3 JASPAR yes 22963173
chr15 41208615 41208625 MEOX2 JASPAR yes 22963174
chr15 41208615 41208625 MIXL1 JASPAR yes 22963175
chr15 41208615 41208625 MNX1 JASPAR yes 22963176
chr15 41208616 41208624 LMX1A JASPAR yes 22963177
chr15 41208616 41208624 LMX1B JASPAR yes 22963178
chr15 41208616 41208624 NKX6-1 JASPAR yes 22963179
chr15 41208616 41208624 NKX6-2 JASPAR yes 22963180
chr15 41208616 41208624 PDX1 JASPAR yes 22963181
chr15 41208616 41208624 VAX1 JASPAR yes 22963182
chr15 41208616 41208624 VAX2 JASPAR yes 22963183
chr15 41208616 41208624 VSX1 JASPAR yes 22963184
Genes associated with rs115476235[chr15:41208624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More