EnhancerDB
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  3. rs115504926[chr1:3454553]
Enhancers that have rs115504926[chr1:3454553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs115504926[chr1:3454553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3452284 3461704 ZNF274 GTRD no Liver (HepG2) 107801863
chr1 3454541 3454561 ESR1 JASPAR yes 26293323
chr1 3454550 3454560 ID4 JASPAR yes 26293325
chr1 3454550 3454560 TCF3 JASPAR yes 26293326
chr1 3454550 3454560 TCF4 JASPAR yes 26293327
chr1 3454551 3454560 SNAI2 JASPAR yes 26293328
chr1 3454552 3454557 USF2 TRANSFAC yes 26293329
chr1 3454552 3454566 PLAG1 JASPAR yes 26293330
Genes associated with rs115504926[chr1:3454553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More