EnhancerDB
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  3. rs115532562[chr16:19708026]
Enhancers that have rs115532562[chr16:19708026]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19704325 19714695 enh16595
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
chr16 19707699 19708034 vista22079
VISTA
Transcript factors that have rs115532562[chr16:19708026]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19707362 19708336 TCF7L2 GTRD no Colon (HCT116) 108186494
chr16 19707421 19709163 TCF7L2 GTRD no Colon (HCT116) 108186495
chr16 19707446 19708314 ZNF143 GTRD no Epithelial (MCF-7) 21695597
chr16 19707446 19708314 ZNF143 GTRD no Epithelial (MCF-7) 108186496
chr16 19707451 19708705 ZNF143 GTRD no Epithelial (MCF-7) 21695598
chr16 19707451 19708705 ZNF143 GTRD no Epithelial (MCF-7) 108186497
chr16 19707491 19708437 ZNF274 GTRD no Bone Marrow (K562) 108186498
chr16 19707509 19708240 ZNF274 GTRD no Bone Marrow (K562) 108186499
chr16 19707535 19708143 TCF7L2 GTRD no Colon (HCT116) 108186500
chr16 19707602 19708040 ZNF274 GTRD no Bone Marrow (K562) 108186503
chr16 19707672 19708032 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108186507
chr16 19707672 19708083 STAT1 UCSC Txn Factor no Conserved 108186508
chr16 19707674 19708083 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21695602
chr16 19707674 19708083 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108186509
chr16 19707681 19708031 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108186510
chr16 19707695 19708051 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108186513
chr16 19707914 19708474 TCF7L2 GTRD no Colon (HCT116) 108186515
chr16 19707980 19708385 ZNF274 GTRD no Bone Marrow (K562) 108186516
chr16 19707983 19708517 ZNF274 GTRD no Bone Marrow (K562) 108186517
chr16 19708022 19708026 H1TF2 TRANSFAC yes 9877181
chr16 19708022 19708026 NFE TRANSFAC yes 9877182
chr16 19708022 19708026 SRF TRANSFAC yes 9877183
chr16 19708022 19708026 H1TF2 TRANSFAC yes 49352102
chr16 19708022 19708026 NFE TRANSFAC yes 49352103
chr16 19708022 19708026 SRF TRANSFAC yes 49352104
chr16 19708022 19708040 IRF2 JASPAR yes 9877184
chr16 19708022 19708040 IRF2 JASPAR yes 49352105
chr16 19708023 19708044 IRF1 JASPAR yes 9877185
chr16 19708023 19708044 IRF1 JASPAR yes 49352106
chr16 19708025 19708040 PRDM1 JASPAR yes 9877186
chr16 19708025 19708040 PRDM1 JASPAR yes 49352107
Genes associated with rs115532562[chr16:19708026], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More