EnhancerDB
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  3. rs115601885[chr16:1344899]
Enhancers that have rs115601885[chr16:1344899]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs115601885[chr16:1344899]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 21684544
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171314
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171315
chr16 1337449 1345452 ZNF143 GTRD no Epithelial (MCF-7) 108171316
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 21684584
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 108171336
chr16 1340801 1345571 TCF7L2 GTRD no Colon (HCT116) 108171337
chr16 1341902 1345076 ZNF143 GTRD no Epithelial (MCF-7) 21684593
chr16 1341902 1345076 ZNF143 GTRD no Epithelial (MCF-7) 108171353
chr16 1342259 1345522 ZNF143 GTRD no Epithelial (MCF-7) 21684598
chr16 1342259 1345522 ZNF143 GTRD no Epithelial (MCF-7) 108171356
chr16 1344191 1345476 ZNF274 GTRD no Bone Marrow (K562) 108171365
chr16 1344587 1345373 TCF7L2 GTRD no Colon (HCT116) 21684669
chr16 1344587 1345373 TCF7L2 GTRD no Colon (HCT116) 108171369
chr16 1344663 1346346 TCF7L2 GTRD no Colon (HCT116) 21684670
chr16 1344670 1345187 ZNF143 GTRD no Epithelial (MCF-7) 21684671
chr16 1344725 1345220 TCF7L2 GTRD no Colon (HCT116) 21684672
chr16 1344883 1344902 RFX2 JASPAR yes 9149448
Genes associated with rs115601885[chr16:1344899], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More