EnhancerDB
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  3. rs115616907[chr17:53530204]
Enhancers that have rs115616907[chr17:53530204]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs115616907[chr17:53530204]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53529613 53530263 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21772697
chr17 53529713 53530329 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772698
chr17 53529740 53530304 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772699
chr17 53529842 53530386 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21772703
chr17 53530195 53530204 VENTX JASPAR yes 54852945
chr17 53530201 53530213 FOXC2 JASPAR yes 54852947
chr17 53530203 53530207 ESR1 TRANSFAC yes 54852948
Genes associated with rs115616907[chr17:53530204], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More