EnhancerDB
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  3. rs115639142[chr1:52011188]
Enhancers that have rs115639142[chr1:52011188]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs115639142[chr1:52011188]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52011179 52011192 SMAD2 JASPAR yes 28848467
chr1 52011180 52011193 EOMES JASPAR yes 28848468
chr1 52011182 52011192 TBR1 JASPAR yes 28848469
chr1 52011182 52011193 TBX20 JASPAR yes 28848470
chr1 52011182 52011193 TBX2 JASPAR yes 28848471
chr1 52011183 52011193 TBX21 JASPAR yes 28848472
chr1 52011184 52011192 MGA JASPAR yes 28848473
chr1 52011184 52011192 TBX15 JASPAR yes 28848474
chr1 52011184 52011192 TBX1 JASPAR yes 28848475
chr1 52011184 52011192 TBX4 JASPAR yes 28848476
chr1 52011184 52011192 TBX5 JASPAR yes 28848477
Genes associated with rs115639142[chr1:52011188], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More