EnhancerDB
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  3. rs115675717[chr1:229038860]
Enhancers that have rs115675717[chr1:229038860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229032385 229043695 enh12754
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Stomach Placenta Breast Thyroid Pancreas Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs115675717[chr1:229038860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229038567 229039217 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389228
chr1 229038649 229039153 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389229
chr1 229038665 229039281 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389230
chr1 229038697 229039213 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389231
chr1 229038709 229039185 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389232
chr1 229038713 229039091 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21389233
chr1 229038724 229039100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389234
chr1 229038729 229039085 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21389235
chr1 229038752 229039222 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21389236
chr1 229038784 229039128 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389237
chr1 229038797 229039181 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389238
chr1 229038801 229039181 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389239
chr1 229038806 229039166 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389240
chr1 229038806 229039176 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389241
chr1 229038807 229039203 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389242
chr1 229038811 229039071 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389243
chr1 229038811 229039151 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389244
chr1 229038817 229039361 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21389245
chr1 229038824 229039228 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389246
chr1 229038826 229039156 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389247
chr1 229038832 229039152 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389248
chr1 229038834 229039164 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389249
chr1 229038840 229039096 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389250
chr1 229038840 229039104 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21389251
chr1 229038842 229038860 ESR2 JASPAR yes 35942207
chr1 229038844 229038864 ESR1 JASPAR yes 35942208
chr1 229038852 229038861 HIC2 JASPAR yes 35942210
chr1 229038856 229038868 NHLH1 JASPAR yes 35942211
chr1 229038856 229038869 ZBTB18 JASPAR yes 35942212
chr1 229038857 229038867 NHLH1 JASPAR yes 35942213
chr1 229038859 229039115 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21389252
Genes associated with rs115675717[chr1:229038860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More