EnhancerDB
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  3. rs115691146[chr17:78844000]
Enhancers that have rs115691146[chr17:78844000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs115691146[chr17:78844000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78842689 78844166 ZBTB33 GTRD no Lung (A549) 108307924
chr17 78842716 78844149 ZBTB33 GTRD no Lung (A549) 108307925
chr17 78842730 78844893 ZNF274 GTRD no Blood (GM12878) 108307926
chr17 78842730 78844893 ZNF274 GTRD no Blood (GM12878) 108307927
chr17 78842834 78844080 ZNF274 GTRD no Cervix (HeLa-S3) 108307929
chr17 78842860 78844060 ZNF143 GTRD no Epithelial (MCF-7) 21797440
chr17 78842860 78844060 ZNF143 GTRD no Epithelial (MCF-7) 108307930
chr17 78842872 78844072 TCF7L2 GTRD no Colon (HCT116) 21797441
chr17 78842872 78844072 TCF7L2 GTRD no Colon (HCT116) 108307931
chr17 78842903 78844044 ZNF143 GTRD no Epithelial (MCF-7) 21797442
chr17 78842903 78844044 ZNF143 GTRD no Epithelial (MCF-7) 108307936
chr17 78842910 78844948 ZBTB33 GTRD no Lung (A549) 108307940
chr17 78842910 78844948 ZBTB33 GTRD no Lung (A549) 108307941
chr17 78842912 78844921 TCF7L2 GTRD no Colon (HCT116) 21797445
chr17 78842912 78844921 TCF7L2 GTRD no Colon (HCT116) 108307942
chr17 78842912 78844921 TCF7L2 GTRD no Colon (HCT116) 108307943
chr17 78842919 78844853 TCF7L2 GTRD no Colon (HCT116) 21797447
chr17 78842919 78844853 TCF7L2 GTRD no Colon (HCT116) 108307945
chr17 78842919 78844853 TCF7L2 GTRD no Colon (HCT116) 108307946
chr17 78843436 78844230 TCF7L2 GTRD no Colon (HCT116) 21797456
chr17 78843436 78844230 TCF7L2 GTRD no Colon (HCT116) 108308000
chr17 78843436 78844230 TCF7L2 GTRD no Colon (HCT116) 108308001
chr17 78843854 78844666 ZNF274 GTRD no Blood (GM12878) 108308002
chr17 78843891 78844779 ZNF274 GTRD no Blood (GM12878) 108308003
chr17 78843967 78844666 ZNF274 GTRD no Blood (GM12878) 108308004
chr17 78843994 78844012 RARA JASPAR yes 56287893
Genes associated with rs115691146[chr17:78844000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More