EnhancerDB
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  3. rs115839488[chr1:180554359]
Enhancers that have rs115839488[chr1:180554359]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180547465 180559715 enh12426
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Stomach Placenta Thyroid Muscle (Myoblast) Pancreas Epithelial (MCF-7)
Transcript factors that have rs115839488[chr1:180554359]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180553973 180554477 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21353769
chr1 180554109 180554489 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21353770
chr1 180554142 180554432 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21353771
chr1 180554145 180554421 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21353772
chr1 180554266 180554641 ZNF274 GTRD no Bone Marrow (K562) 21353773
chr1 180554309 180555910 ZNF143 GTRD no Epithelial (MCF-7) 21353774
chr1 180554309 180555910 ZNF143 GTRD no Epithelial (MCF-7) 107847865
chr1 180554344 180556205 ZNF143 GTRD no Epithelial (MCF-7) 21353775
chr1 180554344 180556205 ZNF143 GTRD no Epithelial (MCF-7) 107847866
chr1 180554357 180554368 FOSL2 JASPAR yes 33528533
chr1 180554358 180554369 NFE2 JASPAR yes 33528534
Genes associated with rs115839488[chr1:180554359], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More