EnhancerDB
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  3. rs115841232[chr1:25020650]
Enhancers that have rs115841232[chr1:25020650]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25002143 25025115 enh11624
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs115841232[chr1:25020650]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017256 25025212 ZNF274 GTRD no Blood (GM12878) 107802463
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25020647 25020661 POU1F1 JASPAR yes 27519208
chr1 25020648 25020660 POU3F1 JASPAR yes 27519209
chr1 25020648 25020660 POU3F2 JASPAR yes 27519210
chr1 25020648 25020661 POU3F3 JASPAR yes 27519211
chr1 25020649 25020661 POU2F1 JASPAR yes 27519212
chr1 25020650 25020659 POU3F4 JASPAR yes 27519213
chr1 25020650 25020659 POU5F1B JASPAR yes 27519214
Genes associated with rs115841232[chr1:25020650], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More