EnhancerDB
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  3. rs115942605[chr1:154978987]
Enhancers that have rs115942605[chr1:154978987]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154972605 154982275 enh12281
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Thymus Heart
Transcript factors that have rs115942605[chr1:154978987]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154978974 154978988 RXRB JASPAR yes 32326996
chr1 154978974 154978988 RXRG JASPAR yes 32326997
chr1 154978982 154978997 TFAP2A JASPAR yes 32326998
chr1 154978982 154978997 TFAP2C JASPAR yes 32326999
chr1 154978985 154978996 TFAP2A JASPAR yes 32327000
chr1 154978985 154978996 TFAP2B JASPAR yes 32327001
chr1 154978985 154978996 TFAP2C JASPAR yes 32327002
chr1 154978986 154978995 TFAP2A JASPAR yes 32327003
Genes associated with rs115942605[chr1:154978987], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More