EnhancerDB
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  3. rs115953745[chr17:53507565]
Enhancers that have rs115953745[chr17:53507565]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs115953745[chr17:53507565]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53507558 53507569 CDX2 JASPAR yes 54849154
chr17 53507559 53507570 HOXA10 JASPAR yes 54849155
chr17 53507560 53507570 HOXD11 JASPAR yes 54849156
chr17 53507560 53507570 HOXD13 JASPAR yes 54849157
chr17 53507560 53507575 MEF2C JASPAR yes 54849158
chr17 53507562 53507566 TEAD2 TRANSFAC yes 54849159
chr17 53507562 53507567 TBP TRANSFAC yes 54849160
chr17 53507562 53507568 TFIID TRANSFAC yes 54849161
chr17 53507564 53507570 TBP TRANSFAC yes 54849162
Genes associated with rs115953745[chr17:53507565], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More