EnhancerDB
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  3. rs116000354[chr5:95170623]
Enhancers that have rs116000354[chr5:95170623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 95166465 95182255 enh8570
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
chr5 95170246 95170624 vista48505
VISTA
Transcript factors that have rs116000354[chr5:95170623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 95170253 95171017 POLR2A UCSC Txn Factor no Conserved 108535781
chr5 95170253 95171017 POLR2A UCSC Txn Factor no Conserved 108535782
chr5 95170593 95171001 CTCF UCSC Txn Factor no Conserved 108535783
chr5 95170593 95171001 CTCF UCSC Txn Factor no Conserved 108535784
chr5 95170613 95170623 GCM2 JASPAR yes 64383871
chr5 95170613 95170623 GCM2 JASPAR yes 70685118
Genes associated with rs116000354[chr5:95170623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More