EnhancerDB
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  3. rs116042446[chr2:223670376]
Enhancers that have rs116042446[chr2:223670376]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 223650265 223674035 enh19259
Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs116042446[chr2:223670376]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 223670287 223670658 STAT3 UCSC Txn Factor no Conserved 108435320
chr2 223670366 223670381 SCRT1 JASPAR yes 81213248
chr2 223670369 223670381 PKNOX1 JASPAR yes 81213250
chr2 223670369 223670381 PKNOX2 JASPAR yes 81213251
chr2 223670369 223670381 TGIF1 JASPAR yes 81213252
chr2 223670369 223670381 TGIF2 JASPAR yes 81213253
chr2 223670370 223670379 SNAI2 JASPAR yes 81213254
chr2 223670370 223670380 FIGLA JASPAR yes 81213255
chr2 223670370 223670380 ID4 JASPAR yes 81213256
chr2 223670370 223670380 MSC JASPAR yes 81213257
chr2 223670370 223670380 MYF6 JASPAR yes 81213258
chr2 223670370 223670380 TCF3 JASPAR yes 81213259
chr2 223670370 223670380 TCF4 JASPAR yes 81213260
chr2 223670372 223670383 TBX2 JASPAR yes 81213261
chr2 223670373 223670381 TBX15 JASPAR yes 81213262
chr2 223670373 223670381 TBX1 JASPAR yes 81213263
chr2 223670373 223670381 TBX4 JASPAR yes 81213264
chr2 223670373 223670381 TBX5 JASPAR yes 81213265
Genes associated with rs116042446[chr2:223670376], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More