EnhancerDB
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  3. rs116054740[chr17:43419848]
Enhancers that have rs116054740[chr17:43419848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43404711 43426395 enh17187
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Uterus Thymus Heart
Transcript factors that have rs116054740[chr17:43419848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43416912 43419892 ZNF274 GTRD no Cervix (HeLa-S3) 21765365
chr17 43418764 43419851 TCF7L2 GTRD no Colon (HCT116) 21765427
chr17 43418797 43419917 ZNF274 GTRD no Bone Marrow (K562) 21765434
chr17 43419523 43419894 TCF7L2 GTRD no Colon (HCT116) 21765459
chr17 43419586 43419944 TCF7L2 GTRD no Colon (HCT116) 21765460
chr17 43419845 43419850 GATA2 JASPAR yes 54446745
Genes associated with rs116054740[chr17:43419848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More