EnhancerDB
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  3. rs116065945[chr17:80269470]
Enhancers that have rs116065945[chr17:80269470]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs116065945[chr17:80269470]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80268304 80270307 ZNF274 GTRD no Bone Marrow (K562) 21800106
chr17 80269019 80269939 ZNF274 GTRD no Bone Marrow (K562) 21800109
chr17 80269096 80270179 ZNF274 GTRD no Bone Marrow (K562) 21800110
chr17 80269155 80269807 ZNF274 GTRD no Bone Marrow (K562) 21800111
chr17 80269318 80269990 ZNF143 GTRD no Epithelial (MCF-7) 21800112
chr17 80269430 80269960 ZNF274 GTRD no Bone Marrow (K562) 21800113
chr17 80269461 80270007 ZNF274 GTRD no Bone Marrow (K562) 21800114
chr17 80269466 80269471 SP1 TRANSFAC yes 56361973
chr17 80269469 80269481 HES5 JASPAR yes 56361974
chr17 80269469 80269481 HES7 JASPAR yes 56361975
chr17 80269469 80269481 PKNOX2 JASPAR yes 56361976
Genes associated with rs116065945[chr17:80269470], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More