EnhancerDB
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  3. rs116068653[chr1:201572368]
Enhancers that have rs116068653[chr1:201572368]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs116068653[chr1:201572368]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201570153 201579304 ZNF274 GTRD no Bone Marrow (K562) 107856725
chr1 201571932 201572376 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21365174
chr1 201571932 201572376 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107856729
chr1 201571963 201572399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856730
chr1 201571995 201572391 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107856732
chr1 201572355 201572374 RFX2 JASPAR yes 34512079
Genes associated with rs116068653[chr1:201572368], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More