EnhancerDB
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  3. rs116078900[chr17:57508357]
Enhancers that have rs116078900[chr17:57508357]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57488685 57509755 enh17259
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Spleen Uterus Heart
Transcript factors that have rs116078900[chr17:57508357]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57505689 57508447 ZBTB33 GTRD no Brain (SK-N-SH) 21775032
chr17 57507125 57509289 ZNF274 GTRD no Blood (GM12878) 108276006
chr17 57507714 57508474 ZBTB33 GTRD no Brain (SK-N-SH) 21775055
chr17 57507830 57508402 ZNF143 GTRD no Epithelial (MCF-7) 21775057
chr17 57508000 57508458 ZNF143 GTRD no Epithelial (MCF-7) 21775059
chr17 57508353 57508368 MEF2A JASPAR yes 55059484
chr17 57508354 57508366 MEF2A JASPAR yes 55059485
chr17 57508354 57508366 MEF2B JASPAR yes 55059486
chr17 57508354 57508366 MEF2D JASPAR yes 55059487
chr17 57508355 57508365 MEF2A JASPAR yes 55059488
chr17 57508356 57508360 TEAD2 TRANSFAC yes 55059489
chr17 57508356 57508361 TBP TRANSFAC yes 55059490
chr17 57508356 57508362 TMF TRANSFAC yes 55059491
chr17 57508356 57508370 RORA JASPAR yes 55059492
Genes associated with rs116078900[chr17:57508357], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More