EnhancerDB
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  3. rs116097230[chr16:85405201]
Enhancers that have rs116097230[chr16:85405201]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85390172 85421515 enh16868
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Heart
chr16 85405119 85405354 vista23299
VISTA
Transcript factors that have rs116097230[chr16:85405201]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85405191 85405204 TFAP2A JASPAR yes 12053296
chr16 85405191 85405204 TFAP2B JASPAR yes 12053297
chr16 85405191 85405204 TFAP2C JASPAR yes 12053298
chr16 85405191 85405204 TFAP2A JASPAR yes 49407973
chr16 85405191 85405204 TFAP2B JASPAR yes 49407974
chr16 85405191 85405204 TFAP2C JASPAR yes 49407975
chr16 85405198 85405209 NFKB1 JASPAR yes 12053299
chr16 85405198 85405209 NFKB1 JASPAR yes 49407976
chr16 85405199 85405203 LFA1 TRANSFAC yes 12053300
chr16 85405199 85405203 LFA1 TRANSFAC yes 49407977
Genes associated with rs116097230[chr16:85405201], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More