EnhancerDB
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  3. rs116120018[chr17:80260555]
Enhancers that have rs116120018[chr17:80260555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs116120018[chr17:80260555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80258358 80260591 ZNF274 GTRD no Blood (GM12878) 21799428
chr17 80258428 80260572 ZNF274 GTRD no Blood (GM12878) 21799436
chr17 80259125 80260575 ZNF274 GTRD no Bone Marrow (K562) 21799503
chr17 80259298 80260564 ZNF274 GTRD no Bone Marrow (K562) 21799505
chr17 80259317 80260574 ZNF274 GTRD no Bone Marrow (K562) 21799506
chr17 80259371 80260561 ZBTB33 GTRD no Brain (SK-N-SH) 21799509
chr17 80259381 80262776 ZNF143 GTRD no Epithelial (MCF-7) 21799512
chr17 80259433 80260581 ZNF274 GTRD no Bone Marrow (K562) 21799516
chr17 80259459 80260575 ZNF274 GTRD no Liver (HepG2) 21799517
chr17 80259492 80260608 ZNF274 GTRD no Bone Marrow (K562) 21799519
chr17 80259509 80260655 TCF7L2 GTRD no Colon (HCT116) 21799521
chr17 80259515 80260591 ZNF274 GTRD no Blood (GM12878) 21799522
chr17 80259521 80260558 ZNF274 GTRD no Bone Marrow (K562) 21799524
chr17 80259533 80260587 ZNF274 GTRD no Liver (HepG2) 21799525
chr17 80259537 80260575 TCF7L2 GTRD no Colon (HCT116) 21799526
chr17 80259553 80260563 ZNF143 GTRD no Epithelial (MCF-7) 21799528
chr17 80259560 80260600 ZNF274 GTRD no Bone Marrow (K562) 21799529
chr17 80259569 80260617 TCF7L2 GTRD no Colon (HCT116) 21799530
chr17 80259576 80260588 ZNF143 GTRD no Epithelial (MCF-7) 21799532
chr17 80259578 80260574 ZNF274 GTRD no Liver (HepG2) 21799534
chr17 80259593 80260585 TCF7L2 GTRD no Colon (HCT116) 21799535
chr17 80259600 80260598 ZBTB33 GTRD no Brain (SK-N-SH) 21799537
chr17 80259606 80261751 TCF7L2 GTRD no Colon (HCT116) 21799538
chr17 80259623 80260587 ZNF274 GTRD no Bone Marrow (K562) 21799539
chr17 80259631 80260583 ZNF274 GTRD no Liver (HepG2) 21799540
chr17 80259633 80260564 ZNF274 GTRD no Liver (HepG2) 21799541
chr17 80259637 80260555 ZNF274 GTRD no Bone Marrow (K562) 21799542
chr17 80259686 80260582 ZNF274 GTRD no Liver (HepG2) 21799544
chr17 80259702 80260616 ZNF274 GTRD no Cervix (HeLa-S3) 21799546
chr17 80259703 80261688 TCF7L2 GTRD no Colon (HCT116) 21799548
chr17 80259703 80261948 TCF7L2 GTRD no Colon (HCT116) 21799549
chr17 80259710 80260556 ZNF274 GTRD no Liver (HepG2) 21799551
chr17 80259717 80260557 ZNF274 GTRD no Bone Marrow (K562) 21799552
chr17 80259723 80260567 ZNF143 GTRD no Epithelial (MCF-7) 21799554
chr17 80259726 80260567 ZNF143 GTRD no Epithelial (MCF-7) 21799556
chr17 80259730 80260596 ZNF274 GTRD no Bone Marrow (K562) 21799558
chr17 80259733 80260557 TCF7L2 GTRD no Colon (HCT116) 21799559
chr17 80259734 80260564 ZNF274 GTRD no Bone Marrow (K562) 21799560
chr17 80259753 80260569 ZNF274 GTRD no Liver (HepG2) 21799562
chr17 80259768 80260582 TCF7L2 GTRD no Colon (HCT116) 21799564
chr17 80259774 80260556 TCF7L2 GTRD no Colon (HCT116) 21799565
chr17 80259785 80260559 ZNF274 GTRD no Cervix (HeLa-S3) 21799566
chr17 80259790 80260614 ZNF274 GTRD no Cervix (HeLa-S3) 21799568
chr17 80259809 80260622 TCF7L2 GTRD no Colon (HCT116) 21799569
chr17 80259822 80260564 ZNF274 GTRD no Bone Marrow (K562) 21799570
chr17 80259825 80260615 ZBTB33 GTRD no Brain (SK-N-SH) 21799571
chr17 80259852 80262009 TCF7L2 GTRD no Colon (HCT116) 21799576
chr17 80259858 80261559 TCF7L2 GTRD no Colon (HCT116) 21799578
chr17 80259864 80260596 ZNF274 GTRD no Cervix (HeLa-S3) 21799579
chr17 80259866 80260569 ZNF274 GTRD no Cervix (HeLa-S3) 21799580
chr17 80259892 80260556 ZNF274 GTRD no Liver (HepG2) 21799583
chr17 80259898 80260557 ZNF274 GTRD no Cervix (HeLa-S3) 21799586
chr17 80259918 80260592 ZNF274 GTRD no Bone Marrow (K562) 21799589
chr17 80259923 80260621 ZNF274 GTRD no Bone Marrow (K562) 21799592
chr17 80259925 80260596 ZNF274 GTRD no Bone Marrow (K562) 21799594
chr17 80259934 80260561 ZNF143 GTRD no Epithelial (MCF-7) 21799595
chr17 80259952 80260607 ZNF274 GTRD no Blood (GM12878) 21799599
chr17 80259964 80260581 ZNF274 GTRD no Cervix (HeLa-S3) 21799602
chr17 80259967 80260563 ZNF274 GTRD no Bone Marrow (K562) 21799603
chr17 80259967 80260565 ZNF274 GTRD no Bone Marrow (K562) 21799604
chr17 80259969 80260610 ZNF274 GTRD no Blood (GM12878) 21799606
chr17 80259973 80260593 TCF7L2 GTRD no Colon (HCT116) 21799608
chr17 80259992 80260560 ZNF274 GTRD no Blood (GM12878) 21799613
chr17 80260003 80260597 ZNF274 GTRD no Bone Marrow (K562) 21799617
chr17 80260015 80260562 ZNF274 GTRD no Blood (GM12878) 21799618
chr17 80260020 80260574 ZNF143 GTRD no Epithelial (MCF-7) 21799620
chr17 80260029 80260561 ZNF274 GTRD no Liver (HepG2) 21799627
chr17 80260036 80260573 ZNF274 GTRD no Blood (GM12878) 21799631
chr17 80260037 80260607 TCF7L2 GTRD no Colon (HCT116) 21799632
chr17 80260048 80260568 ZNF274 GTRD no Liver (HepG2) 21799636
chr17 80260073 80260591 ZNF274 GTRD no Blood (GM12878) 21799645
chr17 80260075 80260564 ZNF274 GTRD no Liver (HepG2) 21799647
chr17 80260159 80260570 ZNF274 GTRD no Blood (GM12878) 21799657
chr17 80260191 80260571 ZNF274 GTRD no Bone Marrow (K562) 21799664
Genes associated with rs116120018[chr17:80260555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More