EnhancerDB
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  3. rs116123458[chr2:120245224]
Enhancers that have rs116123458[chr2:120245224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 120231916 120251995 enh18838
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Astrocyte Lung (A549) Stomach Placenta Lung (PC-9) Pancreas Muscle (Myotube) Thymus Heart
chr2 120244633 120249040 vista930
VISTA
Transcript factors that have rs116123458[chr2:120245224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 120245209 120245224 FOXP1 JASPAR yes 68279494
chr2 120245209 120245224 FOXP1 JASPAR yes 76489307
chr2 120245210 120245225 FOXA1 JASPAR yes 68279496
chr2 120245210 120245225 FOXA1 JASPAR yes 76489309
chr2 120245218 120245224 SOX10 JASPAR yes 68279512
chr2 120245218 120245224 SOX10 JASPAR yes 76489325
chr2 120245221 120245232 CDX2 JASPAR yes 68279513
chr2 120245221 120245232 CDX2 JASPAR yes 76489326
chr2 120245221 120245236 HNF1A JASPAR yes 68279514
chr2 120245221 120245236 HNF1A JASPAR yes 76489327
chr2 120245222 120245233 HOXA10 JASPAR yes 68279515
chr2 120245222 120245233 HOXA10 JASPAR yes 76489328
chr2 120245223 120245232 CDX1 JASPAR yes 68279516
chr2 120245223 120245232 CDX1 JASPAR yes 76489329
chr2 120245224 120245236 FOXI1 JASPAR yes 68279517
chr2 120245224 120245236 FOXI1 JASPAR yes 76489330
Genes associated with rs116123458[chr2:120245224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More