EnhancerDB
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  3. rs116127079[chr12:117364435]
Enhancers that have rs116127079[chr12:117364435]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117350745 117365303 enh2616
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116127079[chr12:117364435]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117364426 117364436 ALX3 JASPAR yes 124033557
chr12 117364426 117364436 GSX1 JASPAR yes 124033558
chr12 117364426 117364436 GSX2 JASPAR yes 124033559
chr12 117364426 117364436 HOXB2 JASPAR yes 124033560
chr12 117364426 117364436 HOXB3 JASPAR yes 124033561
chr12 117364426 117364436 MEOX2 JASPAR yes 124033562
chr12 117364426 117364436 MIXL1 JASPAR yes 124033563
chr12 117364426 117364436 MNX1 JASPAR yes 124033564
chr12 117364427 117364435 DLX6 JASPAR yes 124033565
chr12 117364427 117364435 EN1 JASPAR yes 124033566
chr12 117364427 117364435 LBX1 JASPAR yes 124033567
chr12 117364427 117364435 PAX4 JASPAR yes 124033568
chr12 117364427 117364435 PDX1 JASPAR yes 124033569
chr12 117364427 117364435 VAX1 JASPAR yes 124033570
chr12 117364427 117364435 VAX2 JASPAR yes 124033571
chr12 117364427 117364435 VSX1 JASPAR yes 124033572
chr12 117364427 117364435 VSX2 JASPAR yes 124033573
chr12 117364432 117364447 SOX21 JASPAR yes 124033574
Genes associated with rs116127079[chr12:117364435], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More