EnhancerDB
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  3. rs116130408[chr2:224713428]
Enhancers that have rs116130408[chr2:224713428]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224709233 224738255 enh19264
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Pancreas (Panc1) Blood (T-cell) Stomach
Transcript factors that have rs116130408[chr2:224713428]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224713412 224713433 IRF1 JASPAR yes 81293575
chr2 224713414 224713429 IRF9 JASPAR yes 81293577
chr2 224713415 224713429 IRF7 JASPAR yes 81293578
chr2 224713415 224713429 IRF8 JASPAR yes 81293579
chr2 224713416 224713431 STAT2 JASPAR yes 81293580
Genes associated with rs116130408[chr2:224713428], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More