EnhancerDB
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  3. rs116139610[chr16:88371123]
Enhancers that have rs116139610[chr16:88371123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88359920 88374013 enh32028
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs116139610[chr16:88371123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88369785 88373141 ZNF143 GTRD no Epithelial (MCF-7) 21736132
chr16 88370675 88371229 ZNF274 GTRD no Bone Marrow (K562) 21736140
chr16 88370856 88373232 ZNF274 GTRD no Bone Marrow (K562) 21736142
chr16 88371090 88371294 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21736143
chr16 88371114 88371125 FOXA1 JASPAR yes 12280422
chr16 88371115 88371135 TP53 JASPAR yes 12280423
Genes associated with rs116139610[chr16:88371123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More