EnhancerDB
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  3. rs116147540[chr12:51217507]
Enhancers that have rs116147540[chr12:51217507]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 51216025 51222415 enh2350
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Stomach Muscle (A673) Blood (Karpas-422) Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs116147540[chr12:51217507]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51216672 51217750 ZNF274 GTRD no Cervix (HeLa-S3) 21545307
chr12 51216743 51218810 ZNF143 GTRD no Epithelial (MCF-7) 21545308
chr12 51216795 51218833 ZNF143 GTRD no Epithelial (MCF-7) 21545309
chr12 51216841 51217538 ZNF143 GTRD no Epithelial (MCF-7) 21545310
chr12 51216865 51217574 ZNF143 GTRD no Epithelial (MCF-7) 21545311
chr12 51216885 51218671 ZNF143 GTRD no Epithelial (MCF-7) 21545312
chr12 51216950 51217565 ZNF143 GTRD no Epithelial (MCF-7) 21545314
chr12 51216972 51218788 ZNF143 GTRD no Epithelial (MCF-7) 21545315
chr12 51216982 51217520 ZNF274 GTRD no Liver (HepG2) 21545317
chr12 51216992 51218814 ZNF143 GTRD no Epithelial (MCF-7) 21545318
chr12 51216999 51217520 ZNF143 GTRD no Epithelial (MCF-7) 21545320
chr12 51217019 51217558 ZNF143 GTRD no Epithelial (MCF-7) 21545323
chr12 51217020 51217515 ZNF274 GTRD no Liver (HepG2) 21545324
chr12 51217026 51217558 ZNF274 GTRD no Liver (HepG2) 21545325
chr12 51217053 51218327 ZNF274 GTRD no Cervix (HeLa-S3) 21545328
chr12 51217065 51218625 ZNF274 GTRD no Liver (HepG2) 21545329
chr12 51217078 51217533 ZNF274 GTRD no Liver (HepG2) 21545331
chr12 51217088 51218860 ZNF143 GTRD no Epithelial (MCF-7) 21545332
chr12 51217138 51217559 ZNF274 GTRD no Liver (HepG2) 21545338
chr12 51217375 51217553 ZNF274 GTRD no Liver (HepG2) 21545340
chr12 51217496 51217507 FOXB1 JASPAR yes 120864114
chr12 51217497 51217508 FOXB1 JASPAR yes 120864116
chr12 51217499 51217507 FOXL1 JASPAR yes 120864117
chr12 51217503 51217515 FOXC2 JASPAR yes 120864118
chr12 51217504 51217515 FOXC1 JASPAR yes 120864119
chr12 51217504 51217519 PRDM1 JASPAR yes 120864120
chr12 51217505 51217509 YY1 TRANSFAC yes 120864121
chr12 51217505 51217519 STAT1 JASPAR yes 120864122
Genes associated with rs116147540[chr12:51217507], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More