EnhancerDB
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  3. rs116148122[chr16:1336486]
Enhancers that have rs116148122[chr16:1336486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1326605 1349655 enh16494
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs116148122[chr16:1336486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1334242 1336744 ZNF143 GTRD no Epithelial (MCF-7) 21684511
chr16 1335058 1337360 TCF7L2 GTRD no Colon (HCT116) 21684516
chr16 1335583 1336582 TCF7L2 GTRD no Colon (HCT116) 21684518
chr16 1335602 1337325 ZNF143 GTRD no Epithelial (MCF-7) 21684519
chr16 1335832 1336622 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21684521
chr16 1335923 1336501 ZNF143 GTRD no Epithelial (MCF-7) 21684522
chr16 1335957 1336517 ZNF143 GTRD no Epithelial (MCF-7) 21684523
chr16 1336004 1336538 TCF7L2 GTRD no Colon (HCT116) 21684524
chr16 1336378 1337234 TCF7L2 GTRD no Colon (HCT116) 21684530
chr16 1336472 1337052 TCF7L2 GTRD no Colon (HCT116) 21684531
chr16 1336485 1336504 CTCF JASPAR yes 9148022
chr16 1336486 1336501 ZIC3 JASPAR yes 9148023
chr16 1336486 1336501 ZIC4 JASPAR yes 9148024
Genes associated with rs116148122[chr16:1336486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More