EnhancerDB
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  3. rs116162506[chr6:13379377]
Enhancers that have rs116162506[chr6:13379377]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13358871 13387475 enh8960
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Heart
Transcript factors that have rs116162506[chr6:13379377]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13379372 13379383 HOXC11 JASPAR yes 100022854
chr6 13379372 13379383 HOXC12 JASPAR yes 100022855
chr6 13379372 13379383 HOXC13 JASPAR yes 100022856
chr6 13379372 13379383 HOXD12 JASPAR yes 100022857
chr6 13379373 13379383 HOXC10 JASPAR yes 100022858
chr6 13379373 13379383 HOXD11 JASPAR yes 100022859
Genes associated with rs116162506[chr6:13379377], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More