EnhancerDB
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  3. rs116163406[chr1:228975349]
Enhancers that have rs116163406[chr1:228975349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs116163406[chr1:228975349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228975052 228976030 AR GTRD no Prostate (PC-3) 21388929
chr1 228975283 228975857 TCF7L2 GTRD no Colon (HCT116) 21388930
Genes associated with rs116163406[chr1:228975349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More