EnhancerDB
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  3. rs116165022[chr11:10661228]
Enhancers that have rs116165022[chr11:10661228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 10657898 10693746 enh13761
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs116165022[chr11:10661228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 10658957 10662178 TCF7L2 GTRD no Colon (HCT116) 21469669
chr11 10658957 10662178 TCF7L2 GTRD no Colon (HCT116) 107957499
chr11 10658980 10661375 ZBTB33 GTRD no Lung (A549) 21469670
chr11 10658980 10661375 ZBTB33 GTRD no Lung (A549) 107957500
chr11 10659203 10661922 TCF7L2 GTRD no Colon (HCT116) 21469682
chr11 10659203 10661922 TCF7L2 GTRD no Colon (HCT116) 107957517
chr11 10661227 10661248 IRF1 JASPAR yes 37327977
chr11 10661227 10661248 ZNF263 JASPAR yes 37327978
chr11 10661228 10661249 ZNF263 JASPAR yes 37327979
Genes associated with rs116165022[chr11:10661228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More