EnhancerDB
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  3. rs116167567[chr17:80245601]
Enhancers that have rs116167567[chr17:80245601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs116167567[chr17:80245601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80245009 80247078 ZNF143 GTRD no Epithelial (MCF-7) 21798573
chr17 80245009 80247078 ZNF143 GTRD no Epithelial (MCF-7) 108311423
chr17 80245038 80247113 TCF7L2 GTRD no Colon (HCT116) 21798577
chr17 80245038 80247113 TCF7L2 GTRD no Colon (HCT116) 108311424
chr17 80245343 80246140 SETDB1 UCSC Txn Factor no Conserved 108311425
chr17 80245504 80247245 TCF7L2 GTRD no Colon (HCT116) 21798581
chr17 80245504 80247245 TCF7L2 GTRD no Colon (HCT116) 108311426
chr17 80245541 80245965 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798582
chr17 80245541 80245965 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108311427
chr17 80245557 80246315 ZNF143 GTRD no Epithelial (MCF-7) 21798583
chr17 80245557 80246315 ZNF143 GTRD no Epithelial (MCF-7) 108311428
chr17 80245601 80245621 RREB1 JASPAR yes 56358037
Genes associated with rs116167567[chr17:80245601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More