EnhancerDB
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  3. rs116179018[chr1:220511962]
Enhancers that have rs116179018[chr1:220511962]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220507105 220520135 enh12680
Skin (Keratinocyte) Prostate (RWPE1) Esophagus Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116179018[chr1:220511962]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220511048 220512567 ZNF274 GTRD no Cervix (HeLa-S3) 107871020
chr1 220511471 220512579 ZNF274 GTRD no Bone Marrow (K562) 107871021
chr1 220511508 220512535 ZNF274 GTRD no Cervix (HeLa-S3) 107871022
chr1 220511552 220512427 ZBTB33 GTRD no Lung (A549) 107871023
chr1 220511610 220512725 AR GTRD no Prostate (PC-3) 107871024
chr1 220511661 220512363 ZNF143 GTRD no Epithelial (MCF-7) 21381655
chr1 220511661 220512363 ZNF143 GTRD no Epithelial (MCF-7) 107871025
chr1 220511689 220512307 ZNF274 GTRD no Cervix (HeLa-S3) 107871026
chr1 220511702 220512211 ZNF143 GTRD no Epithelial (MCF-7) 21381656
chr1 220511703 220512387 ZNF143 GTRD no Epithelial (MCF-7) 21381657
chr1 220511703 220512387 ZNF143 GTRD no Epithelial (MCF-7) 107871027
chr1 220511706 220512289 ZNF274 GTRD no Bone Marrow (K562) 107871028
chr1 220511716 220512364 ZNF274 GTRD no Cervix (HeLa-S3) 107871029
chr1 220511779 220512268 ZNF143 GTRD no Epithelial (MCF-7) 21381658
chr1 220511793 220512057 ZNF143 GTRD no Epithelial (MCF-7) 21381659
chr1 220511802 220512282 ZNF274 GTRD no Liver (HepG2) 107871030
chr1 220511804 220512201 ZNF143 GTRD no Epithelial (MCF-7) 21381660
chr1 220511825 220512122 ZNF143 GTRD no Epithelial (MCF-7) 21381661
chr1 220511840 220512143 ZNF143 GTRD no Epithelial (MCF-7) 21381662
chr1 220511844 220512244 ZNF143 GTRD no Epithelial (MCF-7) 21381663
chr1 220511862 220512158 ZNF143 GTRD no Epithelial (MCF-7) 21381664
chr1 220511875 220512159 ZNF143 GTRD no Epithelial (MCF-7) 21381665
chr1 220511957 220511975 RARA JASPAR yes 35485673
Genes associated with rs116179018[chr1:220511962], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More