EnhancerDB
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  3. rs116179627[chr2:121311680]
Enhancers that have rs116179627[chr2:121311680]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121291785 121313375 enh18845
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs116179627[chr2:121311680]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121311664 121311680 POU4F2 JASPAR yes 76549044
chr2 121311671 121311681 ALX3 JASPAR yes 76549045
chr2 121311671 121311681 EMX1 JASPAR yes 76549046
chr2 121311671 121311681 GSX2 JASPAR yes 76549047
chr2 121311671 121311681 HOXA2 JASPAR yes 76549048
chr2 121311671 121311681 HOXB2 JASPAR yes 76549049
chr2 121311671 121311681 HOXB3 JASPAR yes 76549050
chr2 121311671 121311681 MEOX1 JASPAR yes 76549051
chr2 121311671 121311681 MEOX2 JASPAR yes 76549052
chr2 121311671 121311681 MIXL1 JASPAR yes 76549053
chr2 121311671 121311681 MNX1 JASPAR yes 76549054
chr2 121311672 121311680 LMX1A JASPAR yes 76549055
chr2 121311672 121311680 LMX1B JASPAR yes 76549056
chr2 121311672 121311680 NKX6-1 JASPAR yes 76549057
chr2 121311672 121311680 NKX6-2 JASPAR yes 76549058
chr2 121311672 121311680 PDX1 JASPAR yes 76549059
chr2 121311672 121311680 VAX1 JASPAR yes 76549060
chr2 121311672 121311680 VAX2 JASPAR yes 76549061
chr2 121311672 121311680 VSX1 JASPAR yes 76549062
Genes associated with rs116179627[chr2:121311680], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More