EnhancerDB
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  3. rs116179710[chr6:41686549]
Enhancers that have rs116179710[chr6:41686549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs116179710[chr6:41686549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41686538 41686549 ETV2 JASPAR yes 101668903
chr6 41686539 41686549 ETS1 JASPAR yes 101668904
chr6 41686543 41686557 STAT1 JASPAR yes 101668905
chr6 41686543 41686561 IRF2 JASPAR yes 101668906
chr6 41686544 41686558 TCF7L2 JASPAR yes 101668907
chr6 41686544 41686559 LEF1 JASPAR yes 101668908
chr6 41686548 41686554 TCF4 TRANSFAC yes 101668909
Genes associated with rs116179710[chr6:41686549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More