EnhancerDB
  1. Home
  2. SNP
  3. rs116197849[chr1:118371800]
Enhancers that have rs116197849[chr1:118371800]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118361306 118373131 enh27111
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Heart
Transcript factors that have rs116197849[chr1:118371800]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118371793 118371804 FOSL2 JASPAR yes 31903270
chr1 118371795 118371808 SMAD2 JASPAR yes 31903271
chr1 118371798 118371808 TBR1 JASPAR yes 31903272
chr1 118371799 118371809 TBX21 JASPAR yes 31903273
chr1 118371800 118371808 MGA JASPAR yes 31903274
chr1 118371800 118371808 TBX15 JASPAR yes 31903275
chr1 118371800 118371808 TBX1 JASPAR yes 31903276
chr1 118371800 118371808 TBX4 JASPAR yes 31903277
chr1 118371800 118371808 TBX5 JASPAR yes 31903278
chr1 118371800 118371809 ZEB1 JASPAR yes 31903279
Genes associated with rs116197849[chr1:118371800], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More