EnhancerDB
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  3. rs116209679[chr2:39331442]
Enhancers that have rs116209679[chr2:39331442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39316774 39331447 enh5437
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs116209679[chr2:39331442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39331428 39331442 ONECUT2 JASPAR yes 73182590
chr2 39331428 39331442 ONECUT3 JASPAR yes 73182591
chr2 39331428 39331443 HNF1A JASPAR yes 73182592
chr2 39331429 39331442 HNF1B JASPAR yes 73182593
chr2 39331429 39331443 POU4F1 JASPAR yes 73182594
chr2 39331429 39331444 FOXA1 JASPAR yes 73182595
chr2 39331429 39331445 POU4F2 JASPAR yes 73182596
chr2 39331429 39331445 POU4F3 JASPAR yes 73182597
chr2 39331430 39331442 FOXC2 JASPAR yes 73182601
chr2 39331431 39331443 FOXI1 JASPAR yes 73182602
chr2 39331433 39331447 POU4F1 JASPAR yes 73182603
Genes associated with rs116209679[chr2:39331442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More